Key Responsibilities:

• Develop bioinformatic methods for microbial pangenome analysis and functional characterization of microbial genes
• Contribute to the development and improvement of Aviwell’s bioinformatics pipelines
• Analyze and interpret multi-omics sequencing datasets (genomics, metagenomics, transcriptomics, etc.)
• Collaborate closely with cross-functional teams, particularly members of the Aviwell Discovery Platform
• Participate in discussions with researchers to define sequencing strategies and interpret results

Qualifications and Experience:

Education : PhD in either Bioinformatics, Computational biology or data science. Biology background could also be considered

Minimum Work Requirements:

• Demonstrated work experience in the field.
• Knowledge and Programming skills in a combination of the following : Unix environment (Linux), Bash, Python, R, perl, C ++, Pipeline languages (Snakemake, Nextflow), HPC, Cloud computing
• Fluent in either French or English. At minimum A2-Elementary level in the second language is better.

Ideally, would also :

• Have expertise in the field of microbiology and/or metagenomic
• Have expertise in quality assurance practices relevant to digital data.

Skills:

• Proficient at adapting his knowledge to various needs
• Work is autonomous, well-organized, of high-quality, meeting timelines. Able to balance concurrent tasks and responsibilities.
• Works effectively in international teams and with multi-disciplinary groups.
• Brings creative ideas and makes suggestions for optimization.
• Ability to adapt and improve your skills to the constant evolution of your field
• Good communication skills, team spirit and high motivation

Location : Toulouse, France

Start : as soon as possible

Contract type: up to 18 months CDD with high potential to be converted in CDI